PIGBLUP and BREEDPLANAnimal Genetics and Breeding Unit of University of New England, Australia have developed BLUP software for genetic selection of swine and beef cattle. Little information is on this site, so ABRI would have to be contacted. http://abri.une.edu.au |
Genetic Linkage AnalysisOffers links and other resources for genetic analysis software from The Rockefeller University. http://linkage.rockefeller.edu |
Laboratory of Plant Breeding, WageningenOffers free downloadable genetics and plant breeding related software. http://www.dpw.wau.nl/pv |
Advanced Genetics WizardOnline program that calculates the distribution of offspring genotypes from dominant, codominant and recessive gene crosses, for up to 6 genes. http://www.geneticswizard.com |
Alice SoftwareDatabase system to build and publish synonymised checklists of species. Species descriptions include pre-established fields and detailed descriptions employing any number of user-defined fields. http://www.alicesoftware.com |
CircuSoft Instrumentation LLCTransgenic mouse colony tracking and management software for Mac or Windows. Includes demo software and manuals. http://www.circusoft.com/gmouse.html |
MuStaR Sequence Variant DatabaseDesigned to create a database of mutation loci, to make this information available to as many people as possible. http://www.hgu.mrc.ac.uk/softdata/mustar |
MapPopSoftware for selective mapping and bin mapping by Daniel Brown and Todd Vision. WIN version, documentation and references are available here. http://www.bio.unc.edu/faculty/vision/lab/mappop |
TagSorterDatabase application designed to simplify the collation, sorting, comparison and identification of SAGE tag sequences. http://www.tagsorter.com |
The Darwin ManualGuide and list of commands used to run this programming language. Library contains programs to compute pairwise alignments, phylogenetic trees, multiple sequence alignments, and to make secondary structure predictions. http://www.inf.ethz.ch/personal/gonnet/darwinmanual/darwinmanual.html |
Statistical Genetics SoftwareCollection of primarily Fortan programs for genetic analysis. Requires registration to download. http://www.biomath.medsch.ucla.edu/faculty/klange/software.html |
High Performance Computing andUS National Institutes of Health site with extensive genetic linkage analysis application resources on high performance computer systems. Formerly the Computational Methods and Algorithms Group. http://hpcio.cit.nih.gov |
Progeny SoftwareSupply pedigree drawing and genetic data management software for genetic research with a built-in customizable relational database. http://www.progeny2000.com |
DRIFTGraphically represents the effect of genetic drift on gene frequency of one or more populations for a single locus, two allele model in a closed population using stochastic simulation methods. The DOS program is free. http://nitro.biosci.arizona.edu/zbook/general/gened.html |
Genetic Network Maps as Java AppletsGenetic networks controlling development in Sea Urchin represented as Java applets. Formal scheme. Molecular interactions modelled as Petri Net. http://www.csa.ru/inst/gorb_dep/inbios/genet/urchin/u0maps.htm |
Hands on GeneticsInstructional software for basic genetics, such as DNA, PCR, Mendel, Hardy-Weinberg, meiosis and computer simulations. Download WIN and MAC demos and order online. http://www.handsongenetics.com |
Genetics SoftwareRASA 2.2 and other Mac software for phylogenetics, comparative genomics, and sequence analysis - from Penn State University. http://evolution.genetics.washington.edu/phylip/software.pars.html |
Istituto di Genetica Biochimica edProgram that performs a permutation-based statistical test to detect genetic divergence among populations from DNA fingerprinting data . Downloadable source Fortran code, executable files and user manual . http://www.igbe.pv.cnr.it/software.html |
Big Bench SoftwareDatabase application for transgenic mouse colonies. Built-in networking capabilites, for both Mac and PC. Downloadable demo version. http://www.bigbenchsoftware.com |
STRandOpen-source program to automate or speed up the analysis of DNA fragment length polymorphism samples run on fluorescence based gels . Instructions for use and program download available . http://www.vgl.ucdavis.edu/strand |
GeneticStudioA complete suite of population genetic analysis programs for MAC. Includes plug-in modules. http://www.umsl.edu/~biology/dyer/geneticstudio |